You have a problem in three frontiers: quality of inputs, the process and hygiene.
* 100% of bottles have gas - indicates poor hygiene, insufficient processing or post processing contamination.
* 90% of bottles have bad smell - hygiene issue. How do you clean the processing and filling machines? How do you clean the bottles? Do the bottles have air-tight seals?
* 80% of bottles have fungus - hygiene and post processing contamination. Where do you store your bottles before packaging? Do you have pre-packaging sterilization program in place? What measures have you put in place to ensure that the air quality in the processing room is clean? Do you have a policy on PPE in place?
You have indicated that the formulation contains 12% sugar. At what point of the process do you add the sugar? It'd be great if you can share your processing flow chart for close scrutiny. Please note that addition of sugar affects the heat value of the mass, therefore, the pasteurization conditions you have indicated in your query above seem insufficient for complete pasteurization of the juice. I am sure you have a QA book in your processing facility for this specific product and the pasteurization conditions are indicated therein. Your QA manager is sleeping on the job and if you don't take responsibility, you will close your company in 3 months max.